Changelog

Updated tests to accommodate upcoming changes to the rlang package. No change to test coverage was made.

Added the vignette cmstatr_Validation
Updated the expected value of the order statistic of a normally distributed variable in the implementation of hk_ext_z_j_opt. This affects the Basis values computed by basis_hk_ext when method="optimum-order". Both the new and old implementations appear to perform equally well. See the vignette hk_ext for more information.
Added the function nested_data_plot for producing nested data plots.
Added the vignette hk_ext
Updated the vignette cmstatr_Graphing to show some examples of the use of nested_data_plot.
Added the additional column batch to the carbon.data.2 example data set.
In k_factor_normal, suppress warnings emitted by qt when the non-central parameter is large.
Updated the test to use testthat edition 3.

Updated basis_anova so that in cases where the between-batch variance is small compared with the within-batch variance, a tolerance factor that doesn’t consider the structure of the data is used. This matches the recommendation of Vangel (1992).
Added the alias override="all" to allow overriding all applicable diagnostic tests that are automatically run by the basis_... functions.
Improved documentation of diagnostic tests
Added na.rm argument to cv with identical behavior to the na.rm argument of mean and sd.
Fixed bug causing maximum_normed_residual to fail with small data sets where all but two observations would be considered outliers.
When diagnostic tests produce an error (when automatically run by the basis_... functions), the error message now identifies which test produced the error.

Fixed bug in glance.equiv_mean_extremum where it would include empty values when a sample was not specified.
Moved dplyr from Suggests to Depends. It is expected that nearly all users will use this package in their workflow, and a future version of cmstatr will also rely on functionality from dplyr.
Changed tests and vignettes such that tests and vignette code is not re-run when the necessary packages are not available. Test coverage and re-building of vignettes is unchanged when all packages in Depends and Suggests are available.

Added optional argument to glance.basis to add diagnostic test results to resulting data.frame

Improved the documentation for several functions
Made minor formatting changes to the print methods for:
- ad_ksample
- anderson_darling
- basis
- equiv_mean_extremum
- equiv_chage_mean
- levene_test
- maximum_normed_residual
Added alpha into the mnr object, and updated print and glance methods to show the value of alpha specified by the user

Renamed transform_mod_cv_2 to transform_mod_cv_ad to better describe the purpose of this function.
Removed the optional argument from transform_mod_cv. Now if several groups are to be transformed separately, this needs to be done explicitly using dplyr::group_by or a similar strategy.
Fixed bug related to the automated diagnostic tests of pooled basis methods when modcv = TRUE. Previously, the diagnostic tests were performed with the unmodified data. After this bug fix, the the data after the modified CV transform is used for the diagnostic tests.
Added stat extensions to ggplot2:
- stat_normal_surv_func to plot a normal survival function based on the data given
- stat_esf to plot an empirical survival function
Updated cmstatr_Tutorial vignette
Created cmstatr_Graphing vignette
Various documentation improvements

Added automated diagnostic tests to basis_… methods
Updated argument names for functions:
- transform_mod_cv
- transform_mod_cv_2
- normalize_group_mean
Updated cmstatr_Tutorial vignette

Added modified CV functionality
Added glance and augment methods for most objects
Added function for calculating CV of a sample
Breaking changes:
- Renamed function basis_nonparametric_large_sample to basis_nonpara_large_sample
- Renamed function nonparametric_binomial_rank to nonpara_binomial_rank

Version 0.9.1 Unreleased